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Publications

Published Work - 2015

Percy AJ, Mohammed Y, Yang J, Borchers CH.

Bioanalysis. 2015

A standardized kit for automated quantitative assessment of candidate protein biomarkers in human plasma.

Parker CE, Borchers CH.

Methods. 2015

Editorial.

Penn AM, Lu L, Chambers AG, Balshaw RF, Morrison JL, Votova K, Wood E, Smith DS, Lesperance M, del Zoppo GJ, Borchers CH; SpecTRA Study Group..

Genome. 2015

Exploring phlebotomy technique as a pre-analytical factor in proteomic analyses by mass spectrometry.

Hagel JM, Mandal R, Han B, Han J, Dinsmore DR, Borchers CH, Wishart DS, Facchini PJ.

BMC Plant Biol. 2015

Metabolome analysis of 20 taxonomically related benzylisoquinoline alkaloid-producing plants.

Chambers AG, Percy AJ, Yang J, Borchers CH.

Mol Cell Proteomics. 2015

Multiple Reaction Monitoring Enables Precise Quantification of 97 Proteins in Dried Blood Spots.

Mohammed Y, Borchers CH.

J Proteomics. 2015

An extensive library of surrogate peptides for all human proteins.

Petrotchenko EV, Borchers CH.

J Am Soc Mass Spectrom. 2015

HDX match software for the data analysis of top-down ECD-FTMS hydrogen/deuterium exchange experiments.

Horvatovich P, Lundberg EK, Chen YJ, Sung TY, He F, Nice EC, Goode RJ, Yu S, Ranganathan S, Baker MS, Domont GB, Velasquez E, Li D, Liu S, Wang Q, He QY, Menon R, Guan Y, Corrales FJ, Segura V, Casal JI, Pascual-Montano A, et al.

J Proteome Res. 2015

Quest for Missing Proteins: Update 2015 on Chromosome-Centric Human Proteome Project.

Pan J, Zhang S, Chou A, Hardie DB, Borchers CH.

Anal Chem. 2015

Fast Comparative Structural Characterization of Intact Therapeutic Antibodies Using Hydrogen-Deuterium Exchange and Electron Transfer Dissociation.

Percy AJ, Yang J, Hardie DB, Chambers AG, Tamura-Wells J, Borchers CH.

Methods. 2015

Precise quantitation of 136 urinary proteins by LC/MRM-MS using stable isotope labeled peptides as internal standards for biomarker discovery and/or verification studies.

Jamnik J, García-Bailo B, Borchers CH, El-Sohemy A.

J Nutr. 2015

Gluten Intake Is Positively Associated with Plasma α2-Macroglobulin in Young Adults.

Bracht T, Schweinsberg V, Trippler M, Kohl M, Ahrens M, Padden J, Naboulsi W, Barkovits K, Megger DA, Eisenacher M, Borchers CH, Schlaak JF, Hoffmann AC, Weber F, Baba HA, Meyer HE, Sitek B.

J Proteome Res. 2015

Analysis of disease-associated protein expression using quantitative proteomics—fibulin-5 is expressed in association with hepatic fibrosis.

Tremlett H, Dai DL, Hollander Z, Kapanen A, Aziz T, Wilson-McManus JE, Tebbutt SJ, Borchers CH, Oger J, Cohen Freue GV.

J Proteomics. 2015

Serum proteomics in multiple sclerosis disease progression.

Makepeace KA, Serpa JJ, Petrotchenko EV, Borchers CH.

Methods. 2015

Comprehensive identification of disulfide bonds using non-specific proteinase K digestion and CID-cleavable crosslinking analysis methodology for Orbitrap LC/ESI-MS/MS data.

Abbatiello SE, Schilling B, Mani DR, Zimmerman LJ, Hall SC, MacLean B, Albertolle M, Allen S, Burgess M, Cusack MP, Gosh M, Hedrick V, Held JM, Inerowicz HD, Jackson A, Keshishian H, Kinsinger CR, Lyssand J, Makowski L, Mesri M, Rodriguez H, Rudnick P, et al.

Mol Cell Proteomics. 2015

Large-Scale Interlaboratory Study to Develop, Analytically Validate and Apply Highly Multiplexed, Quantitative Peptide Assays to Measure Cancer-Relevant Proteins in Plasma.

Solomonson M, Setiaputra D, Makepeace KAT, Lameignere E, Petrotchenko EV, Conrady DG, Bergeron JR, Vuckovic M, DiMaio F, Borchers CH, Yip CK, Strynadka NCJ.

Structure. 2015

Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism.

Geisler C, Gaisa NT, Pfister D, Fuessel S, Kristiansen G, Braunschweig T, Gostek S, Beine B, Diehl HC, Jackson AM, Borchers CH, Heidenreich A, Meyer HE, Knüchel R, Henkel C.

Biomed Res Int. 2015

Identification and validation of potential new biomarkers for prostate cancer diagnosis and prognosis using 2D-DIGE and MS.

Plaschka C, Larivière L, Wenzeck L, Seizl M, Hemann M, Tegunov D, Petrotchenko EV, Borchers CH, Baumeister W, Herzog F, Villa E, Cramer P.

Nature. 2015

Architecture of the RNA polymerase II-Mediator core initiation complex.

Wang X, Han J, Yang J, Pan J, Borchers CH.

Chem Sci. 2015

Matrix coating assisted by an electric field (MCAEF) for enhanced tissue imaging by MALDI-MS.

Mohammed Y, Percy AJ, Chambers AG, Borchers CH.

J Proteome Res. 2015

Qualis-SIS: automated standard curve generation and quality assessment for multiplexed targeted quantitative proteomic experiments with labeled standards.

Han J, Liu Y, Wang R, Yang J, Ling V, Borchers CH.

Anal Chem. 2015

Metabolic profiling of bile acids in human and mouse blood by LC-MS/MS in combination with phospholipid-depletion solid-phase extraction.

Han J, Lin K, Sequeira C, Borchers CH.

Anal Chim Acta. 2015

An isotope-labeled chemical derivatization method for the quantitation of short-chain fatty acids in human feces by liquid chromatography-tandem mass spectrometry.

Popp R, Malmström D, Chambers AG, Lin D, Camenzind AG, van der Gugten JG, Holmes DT, Pugia M, Jaremek M, Cornett S, Suckau D, Borchers CH.

Biochim Biophys Acta. 2015

An automated assay for the clinical measurement of plasma renin activity by immuno-MALDI (iMALDI).

Brodie NI, Makepeace KA, Petrotchenko EV, Borchers CH.

J Proteomics. 2015

Isotopically-coded short-range hetero-bifunctional photo-reactive crosslinkers for studying protein structure.